The attack occurred in Apetina, in a remote forested area a few miles from the Ugandan border where attacks by the Allied Democratic Forces (ADF), a Ugandan terrorist group, have increased since Oct. 30, when the army launched a campaign to root them out.
Democratic Republic of Congo President Felix Tshisekedi has said the campaign has dismantled nearly all of the ADF's sanctuaries, but attacks continue unabated.
Earlier this month, 22 were killed in ambushes on two villages in the same region.
"There was a raid by ADF rebels in ... Apetina on Sunday night. These rebels killed 18 people and burned down eight houses," said Donat Kibwana, the administrator of Beni territory.
He said that the army was alerted to the attack but arrived after the killings had occurred. CEPADHO, a human rights group, also said that 18 had been killed.
The Congolese government has blamed the ADF for attacks going back years, including dozens of night-time massacres since 2014 that have killed hundreds of civilians. But repeated military operations have failed to fully eradicate the group.
The recent surge in violence has complicated efforts to stamp out an Ebola outbreak in the area. Infections have started to rise in areas health workers have been unable to access because of insecurity.
Daesh has claimed some ADF attacks this year, but researchers say there is a lack of hard evidence linking the two groups.